Logistics

• setup instructions
• student survey

Notes

• intro (Rmarkdown)
• linearity (Rmarkdown)
• likelihood (Rmarkdown)
• optimization (Rmarkdown)
• simple examples (Rmarkdown)
• challenges (Rmarkdown)
• latent variables/mixed models (Rmarkdown)
• glmmTMB (Rmarkdown)
• nonlinear mixed models (Rmarkdown)
• tools for latent variables (Rmarkdown)
• algal dynamics example (Rmarkdown)

misc R code

• lin reg R code, lin reg TMB code
• class exercises (AM)

Data sets

• partly annotated list
• complete zipped file
• GitHub directory

Miscellaneous links

• PDFs etc. (password-protected)

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Last updated: 21 May 2019